Publications

Chaoqi Yang, Junyi Gao, Lucas Glass, Adam Cross, Jimeng Sun (2023). Multi-Faceted Analysis and Prediction for the Outbreak of Pediatric Respiratory Syncytial Virus. JAMIA.

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Junyi Gao, Joerg Heintz, Christina Mack, Lucas Glass, Adam Cross, Jimeng Sun (2023). Evidence-Driven Spatio-Temporal COVID-19 Hospitalization Prediction with Ising Dynamics. Nature Communications.

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Junyi Gao, Yinghao Zhu, Wenqing Wang, Yasha Wang, Wen Tang, Liantao Ma (2023). A Comprehensive Benchmark For COVID-19 Predictive Modeling Using Electronic Health Records in Intensive Care. AMIA. [Abstract, Oral]

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Chaoqi Yang*, Zhenbang Wu*, Patrick Jiang, Zhen Lin, Junyi Gao, Benjamin Danek, Jimeng Sun (2023). PyHealth: A Deep Learning Toolkit For Healthcare Applications. KDD. [Tutorial]

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Junyi Gao*, Yinghao Zhu*, Wenqing Wang*, Yasha Wang, Wen Tang, Liantao Ma (2022). A Comprehensive Benchmark for COVID-19 Predictive Modeling Using Electronic Health Records in Intensive Care: Choosing the Best Model for COVID-19 Prognosis. arXiv preprint.

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Estee Y. Cramer, et al. [US COVID-19 Forecast Hub Consortium, including Junyi Gao] (2022). The United States COVID-19 Forecast Hub dataset. Nature Scientific Data.

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Junyi Gao, Chaoqi Yang, George Heintz, Scott Barrows, Elise Albers, Mary Stapel, Sara Warfield, Adam Cross, Jimeng Sun (2022). MedML: Fusing Medical Knowledge and Machine Learning Models for Early Pediatric COVID-19 Hospitalization and Severity Prediction. Cell iScience.

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Junyi Gao, Cao Xiao, Lucas Glass, Jimeng Sun (2022). PopNet: Real-Time Population-Level Disease Prediction with Data Latency. WWW.

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Junyi Gao, Rakshith Sharma, Cheng Qian, Lucas M. Glass, Jeffrey Spaeder, Justin Romberg, Jimeng Sun, Cao Xiao (2021). STAN: Spatio-Temporal Attention Network for Pandemic Prediction Using Real World Evidence. JAMIA.

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Liantao Ma, Xinyu Ma, Junyi Gao, Chaohe Zhang, Zhihao Yu, Xianfeng Jiao, Wenjie Ruan, Yasha Wang, Wen Tang, Jiangtao Wang (2021). CovidCare: Transferring Knowledge from Existing EMR to Emerging Epidemic for Interpretable Prognosis. WWW. [Oral]

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Cao Xiao, Junyi Gao, Lucas M. Glass, Jimeng Sun, Christina Mack (2020). Two Machines Are Better Than One: Using Multi-Agent Reinforcement in Machine Learning to Simulate A Clinical Second Opinion. Pharmacoepidemiology and Drug Safety. [Abstract]

Junyi Gao, Cao Xiao, Lucas Glass, Jimeng Sun (2020). Dr. Agent: Clinical Predictive Model via Mimicked Second Opinions. JAMIA.

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Junyi Gao, Cao Xiao, Lucas Glass, Jimeng Sun (2020). COMPOSE: Cross-Modal Pseudo-Siamese Network for Patient Trial Matching. KDD. [Oral]

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Cao Xiao, Junyi Gao, Lucas Glass, Jimeng Sun (2020). Patient trial matching using pseudo-siamese network. JCO. [Abstract]

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Junyi Gao, Cao Xiao, Yasha Wang, Lucas Glass, Wen Tang, Jimeng Sun (2020). StageNet: Stage-Aware Neural Networks for Health Risk Prediction. WWW. [Oral]

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Liantao Ma, Chaohe Zhang, Yashang Wang, Wenjie Ruan, Jiangtao Wang, Wen Tang, Xinyu Ma, Xin Gao, Junyi Gao (2020). ConCare: Personalized Clinical Feature Embedding via Capturing the Healthcare Context. AAAI.

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Liantao Ma, Junyi Gao, Yasha Wang, Chaohe Zhang, Jiangtao Wang, Wenjie Ruan, Wen Tang, Xin Gao and Xinyu Ma (2020). AdaCare: Explainable Clinical Health Status Representation Learning via Scale-Adaptive Feature Extraction and Recalibration. AAAI. [Oral]

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Parsons J. J. , Translated by: Yunxiang Lu, Junyi Gao, Xiaoliang Huo, Yuren Zhang (2019). New Perspectives on Computer Concepts 2018: Comprehensive, 20th. China Machine Press.

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Jingyue Gao, Xiting Wang, Yasha Wang, Zhao Yang, Junyi Gao, Jiangtao Wang, Wen Tang, Xing Xie (2019). CAMP: Co-Attention Memory Networks for Diagnosis Prediction in Healthcare. ICDM. [Oral]

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Junyi Gao*, Weihao Tan*, Liantao Ma, Yasha Wang and Wen Tang (2019). MUSEFood: Multi-sensor-based Food Volume Estimation on Smartphones. IEEE UIC. [Oral]

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Wen Tang, Junyi Gao, Xinyu Ma, Chaohe Zhang, Liantao Ma, Yasha Wang (2019). Applications of Recurrent Neural Network in Clinical Prognosis Prediction of Peritoneal Dialysis. Journal of Peking University, Health sciences.

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Brookshear J. G. , Translated by: Yunxiang Lu, Junyi Gao, Zhujun Zhang (2019). Computer science: an overview, 12th. People Post Press.

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Zhengtong Shi, Junyi Gao, Liantao Ma, Yasha Wang, Jiangtao Wang, Wen Tang (2018). Multi-sensor integrated food volume measurement based on smartphone. PCC. [Oral]

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